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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Npas3Neuronal PAS domain-containing protein 3. (677 aa)    
Predicted Functional Partners:
Ubxn7
UBX domain-containing protein 7.
    
 0.985
ENSMAUP00000007993
annotation not available
    
 0.931
Arnt2
Aryl hydrocarbon receptor nuclear translocator 2 isoform X1.
    
 0.931
ENSMAUP00000002638
annotation not available
    
 0.840
Vhl
Von Hippel-Lindau disease tumor suppressor isoform X2.
    
 0.840
Egln3
Egl nine homolog 3.
    
 0.833
Egln2
Egl nine homolog 2.
    
 0.833
Egln1
Egl nine homolog 1.
    
 0.833
Cul2
Cullin-2; Belongs to the cullin family.
    
 0.823
ENSMAUP00000010866
annotation not available
    
 0.774
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.