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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MarcoMacrophage receptor MARCO; Pattern recognition receptor (PRR) which binds Gram-positive and Gram-negative bacteria. Also plays a role in binding of unopsonized particles by alveolar macrophages. Binds to the secretoglobin SCGB3A2 (By similarity). (459 aa)    
Predicted Functional Partners:
Ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.662
Ripk4
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.641
Mib2
E3 ubiquitin-protein ligase MIB2.
   
  0.640
Bard1
BRCA1-associated RING domain protein 1 isoform X1.
   
 0.624
Gas7
Growth arrest-specific protein 7 isoform X1.
    
 0.590
Frem1
FRAS1-related extracellular matrix protein 1.
    
 0.579
Slf1
SMC5-SMC6 complex localization factor protein 1 isoform X1.
   
 0.573
Met
Hepatocyte growth factor receptor.
    
  0.572
Mysm1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.572
Mst1r
Macrophage-stimulating protein receptor isoform X2.
    
  0.572
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.