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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem33Transmembrane protein 33 isoform X2. (246 aa)    
Predicted Functional Partners:
Endod1
Endonuclease domain-containing 1 protein.
    
 
 0.646
Nup133
Nuclear pore complex protein Nup133.
    
 
 0.636
Slc30a9
Zinc transporter 9.
   
  
 0.579
Sec13
Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.
      
 0.577
Rtn1
Reticulon.
    
 
 0.570
Bend4
BEN domain-containing protein 4.
      
 0.563
LOC101837672
Reticulon-2.
    
 
 0.554
Rtn4
Reticulon.
    
 
 0.554
Rtn3
Reticulon.
    
 
 0.554
Rtn2
Reticulon.
    
 
 0.554
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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