Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101832726S-phase kinase-associated protein 1 pseudogene. (144 aa)    
Predicted Functional Partners:
Cul1
Cullin-1; Belongs to the cullin family.
   
 0.976
Btrc
F-box/WD repeat-containing protein 1A isoform X2.
    
 0.970
Skp2
S-phase kinase-associated protein 2.
    
 0.968
Cul7
Cullin-7 isoform X2; Belongs to the cullin family.
   
 0.962
Fbxw8
F-box/WD repeat-containing protein 8.
    
 0.959
Fbxw11
F-box/WD repeat-containing protein 11 isoform X1.
    
 0.953
Fbxl19
F-box/LRR-repeat protein 19.
    
 0.952
Fbxl5
F-box/LRR-repeat protein 5.
    
 0.952
Fbxw7
F-box/WD repeat-containing protein 7 isoform X1.
    
 0.946
ENSMAUP00000003260
annotation not available
   
 0.944
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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