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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Znf879-2Zinc finger protein 879 isoform X2. (559 aa)    
Predicted Functional Partners:
Trim28
Transcription intermediary factor 1-beta.
    
 0.801
Trim33
Tripartite motif containing 33.
    
 0.719
Trim24
Transcription intermediary factor 1-alpha isoform X1.
    
 0.679
Tle3
Transducin-like enhancer protein 3 isoform X1.
    
 
 0.638
Metrnl
Meteorin-like protein.
    
 
 0.617
Pitx1
Homeobox protein.
    
 
 0.603
Scai
Protein SCAI; Tumor suppressor which functions to suppress MRTFA-induced SRF transcriptional activity.
      
 0.577
Nfe2l2
Nuclear factor erythroid 2-related factor 2 isoform X1.
      
 0.534
Lamtor2
Ragulator complex protein LAMTOR2 isoform X1.
    
  0.531
Mrps10
28S ribosomal protein S10, mitochondrial isoform X1.
    
  0.529
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.