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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sparcl1SPARC-like protein 1. (651 aa)    
Predicted Functional Partners:
Clec14a
C-type lectin domain family 14 member A.
   
   0.681
Cyyr1
Cysteine and tyrosine-rich protein 1.
   
    0.620
Fam20b
Glycosaminoglycan xylosylkinase.
     
 0.614
Fam20a
Pseudokinase FAM20A.
     
 0.614
Apob
Apolipoprotein B-100.
   
 
  0.613
Gm10267
Double-headed protease inhibitor, submandibular gland-like.
   
 
  0.613
Ibsp
Bone sialoprotein 2 precursor.
   
  
 0.608
Nudt9
ADP-ribose pyrophosphatase, mitochondrial isoform X1.
      
 0.602
Ambn
Ameloblastin isoform X1.
      
 0.597
Cd93
Complement component C1q receptor.
   
   0.584
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.