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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbll1E3 ubiquitin-protein ligase Hakai. (449 aa)    
Predicted Functional Partners:
Virma
Protein virilizer homolog isoform X1.
    
 
 0.969
ENSMAUP00000000116
annotation not available
    
 
 0.956
Wtap
pre-mRNA-splicing regulator WTAP.
    
 
 0.956
Cdh1
Cadherin-1 isoform X1; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.879
Zc3h13
Zinc finger CCCH domain-containing protein 13.
    
 
 0.713
Cdh3
Cadherin-3; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.676
Mettl14
N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family.
    
 
 0.663
Mettl3
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
    
 
 0.663
Dnajb2
dnaJ homolog subfamily B member 2.
    
 
 0.661
Ubqln4
Ubiquilin-4 isoform X1.
     
 0.641
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.