close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VcpTransitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (812 aa)    
Predicted Functional Partners:
Ubxn4
UBX domain-containing protein 4.
    
 0.999
Ubxn6
UBX domain-containing protein 6 isoform X1.
    
 0.999
Nsfl1c
NSFL1 cofactor p47 isoform X1.
   
 0.999
Ubxn7
UBX domain-containing protein 7.
   
 0.999
Nploc4
Nuclear protein localization protein 4 homolog isoform X1.
   
 0.999
Ufd1
Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1.
    
 0.998
Faf1
FAS-associated factor 1.
   
 0.998
Ubxn1
UBX domain-containing protein 1.
    
 0.998
Ubxn2a
UBX domain-containing protein 2A.
   
 0.998
Ubxn2b
UBX domain-containing protein 2B isoform X1.
   
 0.998
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.