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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtwd2DTW domain-containing protein 2. (299 aa)    
Predicted Functional Partners:
Dtwd1
DTW domain-containing protein 1.
      
 0.591
Tsr3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.591
Ocrl
Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.
      
 0.535
Trmt1
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.511
Arsk
Arylsulfatase K isoform X1.
     
 0.444
Brix1
Ribosome biogenesis protein BRX1 homolog.
   
  
 0.414
Dus4l
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
   
  
 0.409
Trmt1l
TRMT1-like protein isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.402
Eipr1
Protein TSSC1.
      
 0.400
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.