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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd29Ankyrin repeat domain-containing protein 29 isoform X1. (309 aa)    
Predicted Functional Partners:
Add1
Alpha-adducin.
    
  0.773
Ppp6c
Serine/threonine-protein phosphatase.
   
 0.745
Ift81
Intraflagellar transport protein 81 homolog.
    
 0.686
Add2
Beta-adducin.
    
  0.685
Ift88
Intraflagellar transport protein 88 homolog.
   
 0.668
Add3
Gamma-adducin isoform X1.
    
  0.665
Ift52
Intraflagellar transport protein 52 homolog isoform X1.
    
 0.664
Rela
Transcription factor p65 isoform X1.
   
 0.662
Relb
Transcription factor RelB.
   
 0.662
Rel
Proto-oncogene c-Rel.
   
 0.662
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.