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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rai1Retinoic acid-induced protein 1. (1892 aa)    
Predicted Functional Partners:
Ash2l
set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.836
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.834
LOC101825348
Histone-lysine N-methyltransferase PRDM9-like.
   
 0.797
Suz12
Polycomb protein SUZ12.
   
 0.765
Mphosph8
M-phase phosphoprotein 8.
    
 0.762
Kdm6a
Lysine-specific demethylase 6A.
   
 0.731
Kdm6b
Lysine-specific demethylase 6B isoform X4.
   
 0.731
ENSMAUP00000005256
annotation not available
   
 0.723
Eed
Polycomb protein EED.
   
 0.723
Prdm5
Zinc finger protein.
   
 0.717
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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