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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Odf2lOuter dense fiber protein 2-like isoform X3. (615 aa)    
Predicted Functional Partners:
Unc79
Protein unc-79 homolog isoform X6.
    
 0.847
Ranbp2
E3 SUMO-protein ligase RanBP2.
    
 0.714
Rims2
Regulating synaptic membrane exocytosis protein 2.
    
 0.697
Kdm6b
Lysine-specific demethylase 6B isoform X4.
   
 0.688
Kdm6a
Lysine-specific demethylase 6A.
    
 0.684
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.684
Ash2l
set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.682
Rab11a
Ras-related protein Rab-11A.
    
 0.665
Rab11b
Ras-related protein Rab-11B.
    
 0.665
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.664
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.