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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rtn4Reticulon. (381 aa)    
Predicted Functional Partners:
Rtn3
Reticulon.
  
 
0.969
Bace2
Beta-secretase 2 isoform X2; Belongs to the peptidase A1 family.
   
 0.916
Bace1
Beta-secretase 1; Belongs to the peptidase A1 family.
   
 0.910
LOC101842857
Beta-secretase 1; Belongs to the peptidase A1 family.
   
 0.910
Omg
Oligodendrocyte-myelin glycoprotein.
    
 0.846
Lingo1
Leucine rich repeat and Ig domain containing 1.
    
 0.846
LOC101832745
Myelin-associated glycoprotein.
     
 0.831
Rtn4r
Reticulon-4 receptor.
    
 0.783
Mapre1
Microtubule-associated protein RP/EB family member 1.
      
 0.733
Rtn2
Reticulon.
 
  
 
 0.709
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.