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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl10l60S ribosomal protein L10-like. (214 aa)    
Predicted Functional Partners:
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ENSMAUP00000006787
annotation not available
  
 0.991
ENSMAUP00000007148
annotation not available
   
 0.989
Rps9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.989
Rps5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.988
Rps16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.988
ENSMAUP00000006329
annotation not available
  
 0.986
Eef2
Elongation factor 2.
  
 0.982
ENSMAUP00000000771
annotation not available
  
 0.981
Rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.981
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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