STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcl2l13Bcl-2-like protein 13 isoform X2. (425 aa)    
Predicted Functional Partners:
Gabarapl1
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.903
Gabarap
GABA type A receptor-associated protein.
    
 0.903
Gabarapl2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.898
Map1lc3b
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.793
Map1lc3a
Microtubule-associated proteins 1A/1B light chain 3A.
    
 0.736
Fkbp8
Peptidylprolyl isomerase.
      
 0.594
Nbr1
Next to BRCA1 gene 1 protein.
      
 0.574
Fundc1
FUN14 domain-containing protein 1.
      
 0.545
Phb2
Prohibitin.
   
  
 0.545
Ambra1
Activating molecule in BECN1-regulated autophagy protein 1.
      
 0.536
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.