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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RabepkRab9 effector protein with kelch motifs. (377 aa)    
Predicted Functional Partners:
Vamp3
Vesicle-associated membrane protein 3.
     
 0.900
Timm21
Mitochondrial import inner membrane translocase subunit Tim21.
   
    0.754
Plin3
Perilipin; Belongs to the perilipin family.
    
  0.722
Stx8
Syntaxin-8 isoform X5.
     
 0.718
Rab9b
Ras-related protein Rab-9B.
    
 0.706
Rhobtb3
Rho-related BTB domain-containing protein 3.
    
 0.694
Plin1
Perilipin; Belongs to the perilipin family.
    
  0.673
Nsf
Vesicle-fusing ATPase.
    
  0.673
Ranbp2
E3 SUMO-protein ligase RanBP2.
    
  0.664
Drg1
Developmentally-regulated GTP-binding protein 1.
    
   0.658
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.