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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbxl12F-box/LRR-repeat protein 12. (273 aa)    
Predicted Functional Partners:
Cul1
Cullin-1; Belongs to the cullin family.
    
 0.858
Cul3
Cullin-3; Belongs to the cullin family.
    
 0.832
LOC101832726
S-phase kinase-associated protein 1 pseudogene.
   
 0.804
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.804
ENSMAUP00000007836
annotation not available
   
 0.804
ENSMAUP00000009902
annotation not available
   
 0.804
ENSMAUP00000003260
annotation not available
    
 0.789
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.789
Nedd8
NEDD8.
    
 0.720
Cacul1
CDK2-associated and cullin domain-containing protein 1 isoform X1; Belongs to the cullin family.
    
 0.715
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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