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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lca5lLebercilin-like protein. (580 aa)    
Predicted Functional Partners:
Wdr90
WD repeat-containing protein 90.
    
   0.706
Camk2g
Calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X3.
    
 0.660
Homer2
Homer protein homolog 2 isoform X1.
    
  0.638
Gnaz
Guanine nucleotide-binding protein G(Z) subunit alpha.
    
  0.635
Gabbr2
Gamma-aminobutyric acid type B receptor subunit 2.
    
 0.616
Gabbr1
Gamma-aminobutyric acid type B receptor subunit 1 isoform X1.
    
 0.616
Ccm2
Cerebral cavernous malformations 2 protein.
    
 
 0.584
Gnb5
Guanine nucleotide-binding protein subunit beta-5.
    
 0.579
Gnb3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
    
 0.579
Gnb2
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.
    
 0.579
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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