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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gtf3c5General transcription factor 3C polypeptide 5 isoform X1. (518 aa)    
Predicted Functional Partners:
Gtf3c3
General transcription factor 3C polypeptide 3.
   
 0.999
Gtf3c1
General transcription factor 3C polypeptide 1 isoform X1.
   
 0.992
Gtf3c4
General transcription factor 3C polypeptide 4.
   
 0.981
Gtf3c2
General transcription factor 3C polypeptide 2 isoform X1.
   
 0.972
Bdp1
Transcription factor TFIIIB component B'' homolog.
    
 0.965
Gtf3c6
General transcription factor 3C polypeptide 6.
   
 0.959
Polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.924
Polr3e
DNA-directed RNA polymerase III subunit RPC5 isoform X1.
     
 0.913
Polr3d
DNA-directed RNA polymerase III subunit RPC4.
     
 0.908
Polr3f
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
 
 0.908
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.