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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saa3Serum amyloid A-3 protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (104 aa)    
Predicted Functional Partners:
Apoe
Apolipoprotein E.
     
 0.634
Apoa4
Apolipoprotein A-IV.
     
 0.599
Apoc2
Apolipoprotein C-II isoform X1.
     
 0.578
Vldlr
Very low-density lipoprotein receptor isoform X1.
     
 0.574
Lpl
Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.
     
 0.562
Apoa5
Apolipoprotein A-V.
   
 
 0.560
LOC101825362
Serum amyloid A-5 protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
  
  
 
0.558
Apob
Apolipoprotein B-100.
   
 
 0.552
Apoc1
Apolipoprotein C-I.
     
 0.551
Lipc
Hepatic triacylglycerol lipase isoform X2.
     
  0.540
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.