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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Defb128Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family. (94 aa)    
Predicted Functional Partners:
Defb124
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.834
Defb123
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.683
Defb28
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.669
Defb135
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.640
Defb136
Beta-defensin 136.
  
  
 0.548
Tmco2
Transmembrane and coiled-coil domain-containing protein 2.
  
     0.510
Defb41
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
   
 
 0.507
Spata25
Spermatogenesis-associated protein 25.
  
     0.503
Bpifa3
BPI fold-containing family A member 3.
  
   
 0.473
I830077J02Rik
Transmembrane protein C1orf162 homolog isoform X2.
  
     0.455
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.