STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1700094D03RikUncharacterized protein C1orf189 homolog isoform X1. (76 aa)    
Predicted Functional Partners:
Wdr90
WD repeat-containing protein 90.
    
   0.946
CUNH1orf194
Uncharacterized protein C1orf194 homolog.
   
   0.874
Pacrg
Parkin coregulated gene protein.
    
   0.870
1700012P22Rik
Uncharacterized protein C1orf158 homolog isoform X1.
    
   0.870
Cfap20
Cilia- and flagella-associated protein 20 isoform X2.
    
   0.870
Cfap126
Protein Flattop.
    
   0.870
CUNH9orf135
Uncharacterized protein C9orf135 homolog.
    
   0.870
Efhb
EF-hand domain-containing family member B.
    
   0.870
Efhc1
EF-hand domain-containing protein 1.
    
   0.870
Cfap52
Cilia- and flagella-associated protein 52.
    
   0.870
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.