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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stk39STE20/SPS1-related proline-alanine-rich protein kinase. (540 aa)    
Predicted Functional Partners:
Sec62
Translocation protein SEC62.
    
 
 0.968
Sec61g
Protein transport protein Sec61 subunit gamma.
   
 
 0.967
Sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.903
Sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.895
Sec61a1
Protein transport protein Sec61 subunit alpha.
    
 
 0.891
Sec61a2
Protein transport protein Sec61 subunit alpha-like.
    
 
 0.891
Cab39
Calcium-binding protein 39.
   
 0.736
ENSMAUP00000018073
annotation not available
   
 0.736
Cab39l
Calcium-binding protein 39-like.
   
 0.725
Slc12a2
Solute carrier family 12 member 2 isoform X1.
    
 
 0.720
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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