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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abca9ATP-binding cassette sub-family A member 9 isoform X1. (1623 aa)    
Predicted Functional Partners:
Cox15
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.613
Gbe1
1,4-alpha-glucan-branching enzyme.
   
 
  0.586
Nr1h3
Oxysterols receptor LXR-alpha isoform X1.
    
 0.562
Nr1h2
Oxysterols receptor LXR-beta isoform X1.
    
 0.562
Bckdk
Protein-serine/threonine kinase.
    
 0.554
Pdk4
Protein-serine/threonine kinase.
    
 0.554
Pdk1
Protein-serine/threonine kinase.
    
 0.554
Pdk2
Protein-serine/threonine kinase.
    
 0.554
Nr1h5
Bile acid receptor-like.
   
 0.548
Nr1h4
Farnesoid-X-receptor beta splice variant 2.
    
 0.546
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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