STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101842592Ankyrin repeat domain-containing protein 13A. (148 aa)    
Predicted Functional Partners:
Ankrd13a
Ankyrin repeat domain-containing protein 13A.
 
     0.906
ENSMAUP00000002256
annotation not available
    
   0.463
Kxd1
ubiquitin-60S ribosomal protein L40.
    
   0.463
LOC101823019
Ubiquitin-like.
    
   0.463
ENSMAUP00000007258
annotation not available
    
   0.463
Ubb
polyubiquitin-B.
    
   0.463
ENSMAUP00000022314
annotation not available
    
   0.463
Arhgap29
Rho GTPase-activating protein 29.
     
 0.446
Arhgap45
Rho GTPase-activating protein 45 isoform X1.
     
 0.442
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.