STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NebNebulin. (6962 aa)    
Predicted Functional Partners:
Tnnt3
Troponin T, fast skeletal muscle isoform X2.
   
 0.548
Tnnt2
Troponin T, cardiac muscle.
   
 0.548
Smim20
Small integral membrane protein 20.
   
 0.548
Tnnt1
Troponin T, slow skeletal muscle isoform X1.
   
 0.548
Sh3glb1
endophilin-B1.
      
 0.545
Tcap
Telethonin.
   
 
 0.545
Gatd1
Parkinson disease 7 domain-containing protein 1 isoform X2.
   
 0.540
Tmod1
Tropomodulin-1.
   
 0.539
Lmod1
Leiomodin-1.
   
 0.539
Tmod2
Tropomodulin-2.
   
 0.539
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.