STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ceacam18LOW QUALITY PROTEIN: carcinoembryonic antigen-related cell adhesion molecule 18. (308 aa)    
Predicted Functional Partners:
Igsf23
LOW QUALITY PROTEIN: immunoglobulin superfamily member 23.
  
 
 0.701
Ift81
Intraflagellar transport protein 81 homolog.
    
 0.686
Ift88
Intraflagellar transport protein 88 homolog.
   
 0.668
Ift52
Intraflagellar transport protein 52 homolog isoform X1.
    
 0.664
Ift80
Intraflagellar transport protein 80 homolog.
    
 0.653
Ift172
Intraflagellar transport protein 172 homolog isoform X1.
    
 0.653
Ift57
Intraflagellar transport protein 57 homolog.
    
 0.651
Katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.643
Chdh
Choline dehydrogenase.
    
 0.635
Ift46
Intraflagellar transport protein 46 homolog.
    
 0.635
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.