Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Arhgap29Rho GTPase-activating protein 29. (1108 aa)    
Predicted Functional Partners:
Cdc42
Cell division control protein 42 homolog isoform X1.
   
 0.783
Rnd3
Rho-related GTP-binding protein RhoE.
    
 0.743
Jph4
Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels.
   
   0.735
Rhoc
Rho-related GTP-binding protein RhoC.
    
 0.655
Rhoa
Transforming protein RhoA-like isoform X2.
    
 0.655
4930544G11Rik
Transforming protein RhoA-like isoform X1.
    
 0.655
Grhl3
Grainyhead-like protein 3 homolog.
      
 0.654
Ptpn13
LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 13.
    
 
 0.653
Rnd1
Rho-related GTP-binding protein Rho6.
    
 0.640
Rhob
Rho-related GTP-binding protein RhoB.
    
 0.636
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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