STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdh13Cadherin-13 isoform X1. (713 aa)    
Predicted Functional Partners:
Ctnnb1
Catenin beta-1.
    
 0.820
Ctnnd1
Catenin delta-1 isoform X7.
    
 0.810
Arvcf
Armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1.
    
 0.783
Jup
Junction plakoglobin.
    
 0.780
Ctnna2
Catenin alpha-2 isoform X1.
    
 0.728
Ctnna1
Catenin alpha-1.
    
 0.728
Ctnna3
Catenin alpha-3.
    
 0.717
Vinac1
Vinculin/alpha-catenin family member 1.
    
 0.717
Ctnnd2-2
Catenin delta-2.
    
 0.714
Ctnnd2
Catenin delta 2.
    
 0.714
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.