STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd27Ankyrin repeat domain-containing protein 27. (894 aa)    
Predicted Functional Partners:
Vamp7
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.965
Rab32
Ras-related protein Rab-32.
    
 
 0.957
Rabep2
Rab GTPase-binding effector protein 2.
    
 0.906
Rabep1
Rab GTPase-binding effector protein 1 isoform X1.
    
 0.906
Rab21
Ras-related protein Rab-21.
   
 0.892
Rab38
Ras-related protein Rab-38 isoform X1.
    
 
 0.855
ENSMAUP00000002782
annotation not available
   
 
 0.814
ENSMAUP00000005437
annotation not available
   
 
 0.814
Vps29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.801
Eif2b2
Translation initiation factor eIF-2B subunit beta isoform X1; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.768
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.