STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phtf1Putative homeodomain transcription factor 1 isoform X1. (761 aa)    
Predicted Functional Partners:
Msl3
Male-specific lethal 3 homolog isoform X1.
    
 0.900
Msl2
E3 ubiquitin-protein ligase MSL2.
    
 0.855
Maml1
Mastermind-like protein 1.
    
 0.782
Rbpj
Recombining binding protein suppressor of hairless isoform X1.
    
 0.778
Ncstn
Nicastrin.
    
 0.756
Psenen
Gamma-secretase subunit PEN-2.
    
 0.727
Kat8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.716
Kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.716
ENSMAUP00000015340
annotation not available
    
 0.716
Kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.716
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.