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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl1839S ribosomal protein L18, mitochondrial. (157 aa)    
Predicted Functional Partners:
Mrpl4
39S ribosomal protein L4, mitochondrial.
   
   0.985
Mrpl58
peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
   0.985
Mrps30
39S ribosomal protein S30, mitochondrial.
   
   0.984
Mrpl40
39S ribosomal protein L40, mitochondrial.
   
   0.984
Mrpl38
39S ribosomal protein L38, mitochondrial.
   
 
 0.980
Mrpl44
39S ribosomal protein L44, mitochondrial.
   
 
 0.978
Mrpl27
39S ribosomal protein L27, mitochondrial.
   
   0.977
Mrpl47
39S ribosomal protein L47, mitochondrial isoform X1.
   
   0.976
Mrpl20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
   0.976
Mrpl17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.974
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.