STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clstn2Calsyntenin-2. (926 aa)    
Predicted Functional Partners:
Klc4
Kinesin light chain 4.
    
 
 0.690
ENSMAUP00000003897
annotation not available
    
 
 0.690
Klc2
Kinesin light chain 2 isoform X1.
    
 
 0.690
Nphp3
Nephrocystin-3 isoform X1.
    
 
 0.622
Slc18a1
Chromaffin granule amine transporter.
      
 0.574
Nmnat3
Nicotinamide-nucleotide adenylyltransferase.
      
 0.561
Klc3
Kinesin light chain 3 isoform X5.
    
 
 0.532
Aplp2
Amyloid-like protein 2 isoform X1.
   
 
 0.520
App
Amyloid beta A4 protein.
   
 
 0.491
Apba2
Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.
    
 
 0.489
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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