STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nup188Nucleoporin NUP188 homolog. (1380 aa)    
Predicted Functional Partners:
Ranbp2
E3 SUMO-protein ligase RanBP2.
   
 0.994
Nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.992
Nup205
Nuclear pore complex protein Nup205 isoform X6.
   
 0.988
Nup155
Nucleoporin 155.
   
 0.983
Nup54
Nucleoporin p54 isoform X3.
    
 0.971
Ndc1
Nucleoporin NDC1.
    
 0.963
Aaas
Aladin.
   
 0.958
Nup35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.955
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.951
Nup214
Nuclear pore complex protein Nup214 isoform X2.
   
 0.946
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.