STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Farsaphenylalanine--tRNA ligase alpha subunit. (508 aa)    
Predicted Functional Partners:
Farsb
phenylalanyl-tRNA synthetase subunit beta.
  
 0.999
Lrrc47
Leucine-rich repeat-containing protein 47.
  
 0.998
Eprs1
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.932
Yars
Tyrosine--tRNA ligase.
  
  
 0.923
Fars2
phenylalanine--tRNA ligase, mitochondrial.
   
 
0.912
Vars1
valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.910
Fdxacb1
Ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X1.
   
 
 0.852
Alg3
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.786
Ddx56
Probable ATP-dependent RNA helicase DDX56.
  
   0.786
Mybbp1a
Myb-binding protein 1A isoform X2.
   
    0.764
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.