STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scg3Secretogranin-3. (471 aa)    
Predicted Functional Partners:
Fam20c
Extracellular serine/threonine protein kinase FAM20C.
    
  0.697
Chgb
Secretogranin-1.
   
  
 0.668
Chga
chromogranin-A.
   
  
 0.660
Scg5
Neuroendocrine protein 7B2.
   
  
 0.632
Scg2
Secretogranin-2 isoform X1.
   
  
 0.621
Foxj1
Forkhead box protein J1.
   
  0.485
Irf7
Interferon regulatory factor 7 isoform X1.
   
  0.485
Foxl2
Forkhead box protein L2.
   
  0.479
ENSMAUP00000002088
annotation not available
   
  0.479
Foxd3
Forkhead box protein D3.
   
  0.479
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.