STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hnf1bHepatocyte nuclear factor 1-beta isoform X1. (558 aa)    
Predicted Functional Partners:
Pcbd1
Pterin-4-alpha-carbinolamine dehydratase.
    
 
 0.942
ENSMAUP00000007047
annotation not available
    
 
 0.781
Hnf4a
Hepatocyte nuclear factor 4-alpha.
   
 0.739
Hnf4g
Hepatocyte nuclear factor 4-gamma.
   
 0.707
Slc2a2
Solute carrier family 2, facilitated glucose transporter member 2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.659
Foxa3
Hepatocyte nuclear factor 3-gamma.
   
 
 0.623
Onecut1
One cut domain family member.
     
 0.572
Crebbp
CREB-binding protein.
    
 
 0.518
Ep300
Histone acetyltransferase p300 isoform X3.
    
 
 0.455
Foxa2
Hepatocyte nuclear factor 3-beta isoform X2.
     
 0.434
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.