STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r8Nuclear inhibitor of protein phosphatase 1. (351 aa)    
Predicted Functional Partners:
Ppp1ca
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.929
Ppp1cb
Protein phosphatase 1 catalytic subunit beta.
   
 
 0.892
Ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
   
 
 0.878
ENSMAUP00000000324
annotation not available
   
 
 0.802
Acbd3
Golgi resident protein GCP60.
      
 0.771
Dtymk
Thymidylate kinase.
     
 0.753
ENSMAUP00000012479
annotation not available
     
 0.753
Ankrd42
Ankyrin repeat domain-containing protein 42.
      
 0.738
Dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial.
   
 
  0.720
Umps
Uridine 5'-monophosphate synthase.
   
 
  0.717
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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