STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMAUP00000008380annotation not available (68 aa)    
Predicted Functional Partners:
Srsf1
Serine/arginine-rich splicing factor 1.
   
 0.992
Srsf4
Serine/arginine-rich splicing factor 4.
   
 0.973
ENSMAUP00000021312
annotation not available
   
 0.915
Tra2b
Transformer-2 protein homolog beta.
   
 0.913
ENSMAUP00000004100
annotation not available
   
 0.913
Srsf9
Serine/arginine-rich splicing factor 9.
    
 0.844
Srsf2
Serine/arginine-rich splicing factor 2.
   
0.844
Srsf5
Serine/arginine-rich splicing factor 5 isoform X1.
   
 0.835
Srek1
Splicing regulatory glutamine/lysine-rich protein 1 isoform X1.
   
 0.821
ENSMAUP00000001644
annotation not available
   
 0.815
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.