STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HampHepcidin. (87 aa)    
Predicted Functional Partners:
Slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 
 0.958
Lcn2
Neutrophil gelatinase-associated lipocalin; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.929
Igll5
Immunoglobulin lambda-like polypeptide 5.
    
   0.900
Krtap8-1
Keratin-associated protein 8-1.
   
    0.652
Heph
Hephaestin; Belongs to the multicopper oxidase family.
      
 0.650
Hfe
Hereditary hemochromatosis protein isoform X1; Belongs to the MHC class I family.
   
  
 0.613
Hjv
Hemojuvelin.
      
 0.600
Tmprss6
Transmembrane protease serine 6; Belongs to the peptidase S1 family.
      
 0.595
C8g
Complement component C8 gamma chain isoform X1.
   
 
 0.592
Tfr2
Transferrin receptor protein 2 isoform X1.
      
 0.588
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.