STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl42-239S ribosomal protein L42, mitochondrial. (140 aa)    
Predicted Functional Partners:
Mrpl41
39S ribosomal protein L41, mitochondrial.
   
 
 0.953
Mrpl20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.953
Mrpl32
39S ribosomal protein L32, mitochondrial.
   
 
 0.947
Mrpl40
39S ribosomal protein L40, mitochondrial.
   
 
 0.945
Mrps18c
28S ribosomal protein S18c, mitochondrial.
   
 
 0.944
Mrpl22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
   0.940
Mrpl47
39S ribosomal protein L47, mitochondrial isoform X1.
   
 
 0.934
Mrpl44
39S ribosomal protein L44, mitochondrial.
   
 
 0.933
Mrpl43
39S ribosomal protein L43, mitochondrial.
    
   0.933
Mrpl16
39S ribosomal protein L16, mitochondrial.
    
 0.930
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.