STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RogdiProtein rogdi homolog isoform X1. (287 aa)    
Predicted Functional Partners:
Dmxl2
dmX-like protein 2.
    
 
 0.945
Dmxl1
dmX-like protein 1.
    
 
 0.945
Atp6v1e1
V-type proton ATPase subunit E 1.
    
 
 0.803
Atp6v1e2
V-type proton ATPase subunit E 2.
    
 
 0.803
Atp6v1b2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 
 0.778
Atp6v1b1
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 
 0.778
LOC101832726
S-phase kinase-associated protein 1 pseudogene.
    
 
 0.680
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.680
ENSMAUP00000007836
annotation not available
    
 
 0.680
ENSMAUP00000009902
annotation not available
    
 
 0.680
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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