STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Samd11Sterile alpha motif domain-containing protein 11 isoform X1. (543 aa)    
Predicted Functional Partners:
Pgbd5
piggyBac transposable element-derived protein 5.
    
 
 0.646
Znf408
Zinc finger protein 408 isoform X1.
    
 
 0.629
Miox
Inositol oxygenase.
      
 0.595
Fam83c
LOW QUALITY PROTEIN: protein FAM83C.
      
 0.585
Rbm33
RNA-binding protein 33 isoform X1.
      
 0.581
Ush1g
Usher syndrome type-1G protein.
    
 
 0.499
Znf276
Zinc finger protein 276 isoform X1.
    
 
 0.440
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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