STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spg11LOW QUALITY PROTEIN: spatacsin. (2130 aa)    
Predicted Functional Partners:
Zfyve26
Zinc finger FYVE domain-containing protein 26.
   
 
 0.793
Ap5z1
AP-5 complex subunit zeta-1.
    
 
 0.709
Ap5b1
AP-5 complex subunit beta-1.
    
 
 0.705
Ap5m1
AP-5 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.650
Ap5s1
AP-5 complex subunit sigma-1.
    
 
 0.642
Tecpr2
Tectonin beta-propeller repeat-containing protein 2.
   
  
 0.613
Gak
cyclin-G-associated kinase isoform X2.
      
 0.607
Dnajc6
Putative tyrosine-protein phosphatase auxilin isoform X1.
      
 0.607
Spg21
Maspardin.
      
 0.602
Spart
Spartin isoform X1.
      
 0.598
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.