STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem107Transmembrane protein 107 isoform X1. (140 aa)    
Predicted Functional Partners:
Tmem231
Transmembrane protein 231.
   
 0.773
B9d2
B9 domain-containing protein 2.
     
 0.708
Tmem17
Transmembrane protein 17 isoform X1.
     
 0.683
Tmem216
Transmembrane protein 216.
   
 
 0.662
Tmem237
Transmembrane protein 237 isoform X1.
   
 
 0.653
Tmem67
Meckelin.
     
 0.595
ENSMAUP00000007588
annotation not available
   
 
 0.548
B9d1
B9 domain-containing protein 1 isoform X2.
   
 
 0.548
Nphp3
Nephrocystin-3 isoform X1.
      
 0.523
Tmem80
Transmembrane protein 80.
   
 
 0.487
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.