STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hdac3Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (428 aa)    
Predicted Functional Partners:
Ncor2
Nuclear receptor corepressor 2 isoform X13.
    
 0.998
Ncor1
Nuclear receptor corepressor 1.
    
 0.995
Sin3a
Paired amphipathic helix protein Sin3a.
   
 0.969
Gps2
G protein pathway suppressor 2 isoform X2.
    
 0.962
Tbl1xr1
F-box-like/WD repeat-containing protein TBL1XR1.
   
 0.951
Arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.943
Arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.943
Tbl1x
F-box-like/WD repeat-containing protein TBL1X isoform X1.
   
 0.938
Sin3b
Paired amphipathic helix protein Sin3b isoform X1.
   
 0.936
Macroh2a1
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 0.935
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.