STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atxn2lAtaxin-2-like protein isoform X2. (1093 aa)    
Predicted Functional Partners:
Ddx6
Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
    
 
 0.941
Atxn3
Ataxin-3 isoform X4.
    
 0.896
Trnau1ap
tRNA selenocysteine 1-associated protein 1.
    
 
 0.894
Atxn2
Ataxin-2 isoform X2.
    
 
0.893
Itpr2
Inositol 1,4,5-trisphosphate receptor type 2.
     
 0.859
Itpr1
Inositol 1,4,5-trisphosphate receptor type 1 isoform X2.
     
 0.859
Itpr3
Inositol 1,4,5-trisphosphate receptor type 3.
     
 0.859
Nufip2
Nuclear fragile X mental retardation-interacting protein 2.
    
 
 0.853
Kifbp
KIF1-binding protein.
    
 
 0.846
G3bp2
Ras GTPase-activating protein-binding protein 2 isoform X1.
   
 
 0.837
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.