Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd27 | Cd40lg | ENSMAUP00000010097 | ENSMAUP00000022502 | CD27 antigen. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.700 |
Cd27 | Icos | ENSMAUP00000010097 | ENSMAUP00000021459 | CD27 antigen. | Inducible T-cell costimulator. | 0.566 |
Cd27 | Tnfrsf4 | ENSMAUP00000010097 | ENSMAUP00000024550 | CD27 antigen. | Tumor necrosis factor receptor superfamily member 4 isoform X2. | 0.579 |
Cd27 | Tnfrsf8 | ENSMAUP00000010097 | ENSMAUP00000008391 | CD27 antigen. | Tumor necrosis factor receptor superfamily member 8 isoform X2. | 0.579 |
Cd27 | Tnfrsf9 | ENSMAUP00000010097 | ENSMAUP00000021995 | CD27 antigen. | Tumor necrosis factor receptor superfamily member 9 isoform X2. | 0.572 |
Cd27 | Tnfsf4 | ENSMAUP00000010097 | ENSMAUP00000011453 | CD27 antigen. | Tumor necrosis factor ligand superfamily member 4; Belongs to the tumor necrosis factor family. | 0.600 |
Cd27 | Tnfsf9 | ENSMAUP00000010097 | ENSMAUP00000024299 | CD27 antigen. | Tumor necrosis factor ligand superfamily member 9 isoform X2; Belongs to the tumor necrosis factor family. | 0.633 |
Cd28 | Cd40lg | ENSMAUP00000022808 | ENSMAUP00000022502 | T-cell-specific surface glycoprotein CD28. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.653 |
Cd28 | Icos | ENSMAUP00000022808 | ENSMAUP00000021459 | T-cell-specific surface glycoprotein CD28. | Inducible T-cell costimulator. | 0.642 |
Cd28 | Tnfsf4 | ENSMAUP00000022808 | ENSMAUP00000011453 | T-cell-specific surface glycoprotein CD28. | Tumor necrosis factor ligand superfamily member 4; Belongs to the tumor necrosis factor family. | 0.539 |
Cd40lg | Cd27 | ENSMAUP00000022502 | ENSMAUP00000010097 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | CD27 antigen. | 0.700 |
Cd40lg | Cd28 | ENSMAUP00000022502 | ENSMAUP00000022808 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | T-cell-specific surface glycoprotein CD28. | 0.653 |
Cd40lg | Icos | ENSMAUP00000022502 | ENSMAUP00000021459 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Inducible T-cell costimulator. | 0.973 |
Cd40lg | Il4 | ENSMAUP00000022502 | ENSMAUP00000007897 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Interleukin-4; Participates in at least several B-cell activation processes as well as of other cell types. It is a costimulator of DNA-synthesis. It induces the expression of class II MHC molecules on resting B-cells. It enhances both secretion and cell surface expression of IgE and IgG1. It also regulates the expression of the low affinity Fc receptor for IgE (CD23) on both lymphocytes and monocytes. Positively regulates IL31RA expression in macrophages. Stimulates autophagy in dendritic cells by interfering with mTORC1 signaling and through the induction of RUFY4; Belongs to the IL- [...] | 0.622 |
Cd40lg | Tnfrsf4 | ENSMAUP00000022502 | ENSMAUP00000024550 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor receptor superfamily member 4 isoform X2. | 0.583 |
Cd40lg | Tnfrsf8 | ENSMAUP00000022502 | ENSMAUP00000008391 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor receptor superfamily member 8 isoform X2. | 0.688 |
Cd40lg | Tnfrsf9 | ENSMAUP00000022502 | ENSMAUP00000021995 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor receptor superfamily member 9 isoform X2. | 0.571 |
Cd40lg | Tnfsf4 | ENSMAUP00000022502 | ENSMAUP00000011453 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor ligand superfamily member 4; Belongs to the tumor necrosis factor family. | 0.595 |
Cd40lg | Tnfsf9 | ENSMAUP00000022502 | ENSMAUP00000024299 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor ligand superfamily member 9 isoform X2; Belongs to the tumor necrosis factor family. | 0.531 |
Icos | Cd27 | ENSMAUP00000021459 | ENSMAUP00000010097 | Inducible T-cell costimulator. | CD27 antigen. | 0.566 |
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