STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem123LOW QUALITY PROTEIN: porimin. (106 aa)    
Predicted Functional Partners:
Prpf19
pre-mRNA-processing factor 19 isoform X1.
    
 0.793
Xab2
pre-mRNA-splicing factor SYF1.
    
 0.790
Snw1
SNW domain-containing protein 1.
    
 0.789
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.785
Nup88
Nuclear pore complex protein Nup88.
    
 0.784
Nup155
Nucleoporin 155.
   
 0.780
Nup214
Nuclear pore complex protein Nup214 isoform X2.
    
 0.780
Rangap1
Ran GTPase-activating protein 1.
   
 0.768
Crnkl1
Crooked neck-like protein 1.
   
 0.763
Nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.758
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.