STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VwceVon Willebrand factor C and EGF domain-containing protein isoform X1. (928 aa)    
Predicted Functional Partners:
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.924
Frem1
FRAS1-related extracellular matrix protein 1.
    
 0.776
Gle1
Nucleoporin GLE1.
    
 0.734
Fras1
Extracellular matrix protein FRAS1.
    
 0.733
Asf1a
Histone chaperone ASF1A.
    
 0.665
Asf1b
Histone chaperone ASF1B.
    
 0.665
Nedd8
NEDD8.
   
  0.645
Fas
Tumor necrosis factor receptor superfamily member 6 isoform X1.
    
 0.625
Rps28
40S ribosomal protein S28.
   
   0.614
Hira
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.613
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.